doomconfig/snippets/snakemake-mode/rule

# -*- mode: snippet -*-
# name: Snakemake complete rule
# key: rule
# condition: t
# --

rule $1:
     input:
        $2
     output:
         $3
     params:
         $4
     log:
         stdout="logs/$5.stdout",
         stderr="logs/$6.stderr"
     shell:
         """
         $7 > "{log.stdout}" 2> "{log.stderr}"
         """