diff --git a/report.org b/report.org index d36784f..b5ff238 100644 --- a/report.org +++ b/report.org @@ -189,6 +189,17 @@ The two main options being Snakemake and Nextflow. Snakemake is a python powered * Methodological approaches ** Duplicate gene detection method used in FTAG Finder +#+begin_src emacs-lisp :exports results :results raw +(setq fig:tag-definitions "#+label: fig:tag-definitions +#+caption[Schematic representation of TAG definitions]: Schematic representation of TAG definitions. Several genes are represented on a linear chromosome. The red box represent a singleton gene. Orange boxes represent a TAG with two duplicate genes seperated by 7 other genes ($\\mathrm{TAG}_7$). Four green boxes constitute a TAG, the gene at the extremities are seperated by three genes ($\\mathrm{TAG}_3$). The two blue boxes represents a TAG with two genes next to each other ($\\mathrm{TAG}_0$). The bended edges represents the homology links between each pair of genes within a TAG. +[[./figures/tag-definition.svg]]") + +(if (eq org-export-current-backend 'html) + fig:tag-definitions + "" + ) +#+end_src + #+begin_export latex \fladdfig{ \includegraphics[width=.9\linewidth]{./figures/tag-definition.pdf}