From a9c2944d66001b69adc20dff82ed8c02f5af6d0f Mon Sep 17 00:00:00 2001 From: Samuel Ortion Date: Fri, 29 Mar 2024 07:59:52 +0100 Subject: [PATCH] Improve figure copied from Lallemand et al. 2020 --- figures/lallemand2020-fig1_copy.pdf | 4 +- figures/lallemand2020-fig1_copy.svg | 1187 +++++++++++++++++++++------ 2 files changed, 926 insertions(+), 265 deletions(-) diff --git a/figures/lallemand2020-fig1_copy.pdf b/figures/lallemand2020-fig1_copy.pdf index 70b33c6..a61621a 100644 --- a/figures/lallemand2020-fig1_copy.pdf +++ b/figures/lallemand2020-fig1_copy.pdf @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:6715675aa7948682339b7d77f4e1649e4aa887ad98f51be638a5463043697094 -size 18041 +oid sha256:6305072bc71c3503b369c829494f9ae578b57da8a66b4c66c02e2ca447b4474e +size 12354 diff --git a/figures/lallemand2020-fig1_copy.svg b/figures/lallemand2020-fig1_copy.svg index be19c31..fff7c65 100644 --- a/figures/lallemand2020-fig1_copy.svg +++ b/figures/lallemand2020-fig1_copy.svg @@ -27,15 +27,15 @@ inkscape:deskcolor="#d1d1d1" inkscape:document-units="mm" showgrid="true" - inkscape:zoom="1.0356019" - inkscape:cx="479.43132" - inkscape:cy="362.10825" + inkscape:zoom="0.74398314" + inkscape:cx="401.89083" + inkscape:cy="616.94947" inkscape:window-width="1920" inkscape:window-height="1008" inkscape:window-x="0" inkscape:window-y="0" inkscape:window-maximized="1" - inkscape:current-layer="g40"> + inkscape:current-layer="layer1"> + + + + + + + + + + + + + + + - A - + id="g64"> - - - - - - - - - - - - - - - - - - + id="g7" + transform="translate(8.6387193,3.9999999)" + style="stroke:#0000ff"> + transform="translate(-11.149481,-3.9999999)"> + transform="translate(-6.7900835,-4.0025177)"> - - - - - - - - - - - - - - - - - - - - + + + + - - whole genome duplication - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + B + id="tspan23" + style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-size:4.23333px;font-family:'TeX Gyre Termes';-inkscape-font-specification:'TeX Gyre Termes, Normal';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;fill:#000000;stroke:none;stroke-width:1" + x="82.582397" + y="29.072666">whole genome duplication + + + unequal crossing-over + style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-size:4.23333px;font-family:'TeX Gyre Termes';-inkscape-font-specification:'TeX Gyre Termes, Normal';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;stroke-width:1" + x="86.394516" + y="61.889977">unequal crossing-over - - + id="g61" + transform="translate(0.52916663)"> - - + d="m 134.60046,78.188776 0.001,8.1133" + id="path46" + sodipodi:nodetypes="cc" /> - - - + id="g62"> + + + + + + + + + + + transduplication + + tandem duplication + id="g54" + transform="matrix(0.75018563,0,0,0.75018563,30.108223,22.451333)"> + style="fill:none;fill-opacity:0.913725;stroke:#000000;stroke-width:0.25;stroke-dasharray:none" + d="m 4.642027,110.0485 17.087494,-0.0217 2.200398,-3.97829 2.289177,3.97129 3.489908,-0.005 3.222609,-3.96686 3.312061,3.95746 7.512654,-0.0108 1.917025,-3.94665 1.972583,3.94106 12.063069,0.0258" + id="path30-8" + sodipodi:nodetypes="ccccccccccc" /> + + + + + style="fill:none;fill-opacity:1;stroke:#000000;stroke-width:0.5;stroke-dasharray:none;stroke-opacity:1;marker-end:url(#Triangle-5)" + d="m 11.67335,110.0485 v -7 l 6.000002,10e-6" + id="path34-6" + sodipodi:nodetypes="ccc" /> + + + + + + + + + + + + + + + + + + + + + DNA transposon + + retroduplication + + + + + + + + + + + + + + + + + + + + + + retrotransposon + retrotransposon + AAAA + retrocopy + + + + + + + segmental duplication + + + + + + + + + + + + A + B + C + D + E + F