18 Commits

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Author	SHA1	Message	Date
Samuel Ortion	6371ed0086	Add phylogenetic tree plot	2025-01-18 15:52:50 +01:00
Samuel Ortion	e7e31798e9	Remove report	2025-01-18 15:51:26 +01:00
Samuel Ortion	f2e3b168be	Add report	2025-01-18 15:38:59 +01:00
Samuel Ortion	5bc8f82d48	Add two missing species	2025-01-12 16:09:58 +01:00
Samuel Ortion	fdf0b282b3	Renamed bash script	2025-01-08 14:11:30 +01:00
Samuel Ortion	ee981b5a26	Update the families and TAGs pipeline	2025-01-08 13:15:15 +01:00
Samuel Ortion	444933efa2	Remove enviroment.yaml	2025-01-03 14:30:54 +01:00
Samuel Ortion	39deb9ff8d	Fix missing else clause	2024-12-30 16:52:41 +01:00
Samuel Ortion	18e9e4f56a	A workflow to count genes, duplicates, singletons and TAG	2024-12-30 11:19:34 +01:00
Samuel Ortion	3e17d75618	Moved families and TAG workflow to subfolder	2024-12-29 14:11:49 +01:00
Samuel Ortion	76852dfaf8	Add family size histogram	2024-12-29 14:06:22 +01:00
Samuel Ortion	a75a0cb305	Update environment	2024-12-29 14:04:43 +01:00
Samuel Ortion	3e3c184153	Add a bash script to compute Ka/Ks	2024-12-24 11:31:02 +01:00
Samuel Ortion	5322a9686a	Add a workflow to extract Ka/Ks values ... Nextflow workflow, but is stuck with memory overflow.	2024-12-24 11:28:30 +01:00
Samuel Ortion	f766ebcc4a	Rust program to generate all gene pairs	2024-12-22 19:15:58 +01:00
Samuel Ortion	13f872cf10	Rust tagfinder	2024-11-08 12:42:59 +01:00
Samuel Ortion	53f6a60943	Update workflow	2024-11-04 11:37:20 +01:00
Samuel Ortion	0540e3699e	Initial Nextflow workflow	2024-10-28 10:46:05 +01:00