Add tag definition figure in SVG format

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Samuel Ortion 2024-04-19 21:46:30 +02:00
parent a4bf5bd5ce
commit 6c0fdbf626
Signed by: sortion
GPG Key ID: 9B02406F8C4FB765
1 changed files with 11 additions and 0 deletions

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@ -189,6 +189,17 @@ The two main options being Snakemake and Nextflow. Snakemake is a python powered
* Methodological approaches * Methodological approaches
** Duplicate gene detection method used in FTAG Finder ** Duplicate gene detection method used in FTAG Finder
#+begin_src emacs-lisp :exports results :results raw
(setq fig:tag-definitions "#+label: fig:tag-definitions
#+caption[Schematic representation of TAG definitions]: Schematic representation of TAG definitions. Several genes are represented on a linear chromosome. The red box represent a singleton gene. Orange boxes represent a TAG with two duplicate genes seperated by 7 other genes ($\\mathrm{TAG}_7$). Four green boxes constitute a TAG, the gene at the extremities are seperated by three genes ($\\mathrm{TAG}_3$). The two blue boxes represents a TAG with two genes next to each other ($\\mathrm{TAG}_0$). The bended edges represents the homology links between each pair of genes within a TAG.
[[./figures/tag-definition.svg]]")
(if (eq org-export-current-backend 'html)
fig:tag-definitions
""
)
#+end_src
#+begin_export latex #+begin_export latex
\fladdfig{ \fladdfig{
\includegraphics[width=.9\linewidth]{./figures/tag-definition.pdf} \includegraphics[width=.9\linewidth]{./figures/tag-definition.pdf}